CDS
| Accession Number | TCMCG051C19330 |
| gbkey | CDS |
| Protein Id | XP_024458685.1 |
| Location | complement(join(3335962..3336228,3336787..3336939,3337187..3337384,3337614..3337770,3337880..3337974,3338628..3338735,3338828..3339085,3339184..3339741,3339900..3340046,3340191..3340421,3340937..3340994,3341073..3341234,3341450..3341575,3342188..3342360,3342444..3342524,3342600..3342708,3342834..3343267,3343946..3344056,3344184..3344384,3344497..3344929,3345042..3345436)) |
| Gene | LOC7496118 |
| GeneID | 7496118 |
| Organism | Populus trichocarpa |
Protein
| Length | 1484aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024602917.1 |
| Definition | DNA helicase INO80 isoform X2 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | DNA helicase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11665
[VIEW IN KEGG] |
| EC |
3.6.4.12
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGCGAATTTTGTTAATAGGAATCTATCAGAGAGGGAATTGAATTCTGTGAAGAGAAAGAGGCGGTATAACAACAGCGAGGGAGAGGAGGAAGATAGACATTTCAGGGCACGCATTACAGAGGATAAGTATCGCTCAATGTTGGGAGAACATATTCAGAAGTACAAGAGGAGGTATAAGGATCCCTTGCCAAGTCCTGCTCCTCCTCCTCCTCCTCCCCCTCCTCCCCGTATGGGGATTCCCATTCCAAAGAGTAGTTTGGGTGGTTCAAAAACTAGGAAGCTCGGGAGTGAGCAGCGAGGAGGGTTACATGACATGGAAACCACATCTGAATGGGCCAATGACATTACTCCATCAAAACGCAGAGACTACCATGAACCGGAGTTTACACCCAAAATATACTATGAACCTCCTTATTTGGATATTGGGGATGGTGTCACTTATAGGATACCCCCCTCTTATGATAAGCTTGCAGCATCATTGAACTTGCCAAGCTTCTCAGATATGCGGGTGGAGGAATTTTACTTGAAGGGCACCTTAGATTTGGGTTCCTTGGCAGCAATGATAGCCAATGATAAAAGGTTTGGGCCTAGAAGCCAAGCAGGGATGGGAGAGCCCCAATCACAATATGAATCACTTCAGGCAAGATTGAAGGCATTGACAGCTTCTAGCTCAGCTGAGAAATTCAGTCTCAAGATATCTGAAGAGGCATTGAATTCCACAATCCCAGAAGGGGCAGCTGGAAATATAAGACGCTCTATTTTGTCAGAGGGTGGTGTAATGCAGGTTTACTATGTTAAGGTTTTGGAGAAAGGAGACACATATGAGATCATTGAGCGGGGTCTACCTAAGAAGCCAAAGATAATTAAAGACCCTTCCATCATTGAGAGGGAGGAAATGGAGAAGATTGGCAAGGTTTGGGTAAACATTGTCAGAAGAGACATACCTAAGCACCATAGGATTTTCACTACGTTGCATCGAAAGCAACTAATTGATGCCAAGAGGTTCTCAGAAAATTGTCAAAGAGAGGTCAAAATGAAGGTTAGTAGATCACTAAAAATAATGAAGGGTGCTGCGATTCGCACTAGGAAGTTAGCTAGAGATATGCTGCTGTTTTGGAAGCGAGTGGATAAGGAGATGGCAGAGGTGAGGAAAAAGGAGGAAAGAGAAGCAGCAGAAGCTTTGAAGCGTGAACAAGAGCTTCGGGAAGCAAAAAGACAGCAGCAAAGGCTCAATTTTCTCATACAACAAACAGAACTCTACAGTCATTTCATGTCAAACAAACCAAGTTCACAGCACTCAGAAGCTTTGCCAATTGGAGATGAAATGACAGATGATCAAGGAATGGATTTGAGCACTGCTGAAGCAGGGCTTGATGATCAGGAAGAAGATCCCGAGGACGCTGAATTGAGAAAAGAGGCTCTCAAAGCTGCTCAAGATGCAGTCTCGAAGCAGAAATTGTTAACAAGTGCTTTTGATATCGAGTGTTCAAAGCTGCGTGAAGCTGCTGATATTGAGGGACCTATAAATGATGCCTCAGTTGCAGGATCTAGCAACATTGATTTGCAGACACCCTCCACCATGCCTGTTACATCAACAGTTCAGGCACCAGAGTTGTTTAGAGGTAGCCTCAAAGAATATCAGTTGAAGGGTCTTCAGTGGCTGGTTAATTGTTATGAGCAGGGTTTAAATGGTATACTTGCTGATGAGATGGGCCTTGGAAAGACTATTCAAGCCATGGCATTCTTGGCTCATTTAGCTGAGGAAAAAAATATTTGGGGTCCTTTTCTGATTGTTGCTCCAGCTTCTGTCTTGAATAACTGGGCTGATGAAATCAGTCGCTTCTGCCCTGACTTGAAAACCCTTCCATATTGGGGTGGGCTTCAAGAGCGGATGGTACTTAGGAAAAACATTAATCCAAAGCGCCTTTACCGAAGGGATGCTGGTTTTCACATTCTCATTACCAGCTATCAATTGCTAGTGTCTGATGAGAAGTATTTTCGGCGTGTGAAATGGCAATACATGGTATTAGATGAAGCCCAGGCTATTAAAAGTGCTAACAGCATAAGATGGAAGACATTGCTCAGTTTTAATTGTCGTAATCGCTTGCTGCTGACTGGTACACCGATTCAGAATAACATGGCAGAATTGTGGGCCCTTCTGCATTTCATCATGCCGACATTGTTTGACAGCCATGAACAGTTCAATGAGTGGTTTTCTAAAGGAATTGAGAACCATGCAGAACACGGGGGTACATTAAATGAACACCAGCTAAACAGATTGCATGCAATTCTTAAGCCTTTTATGCTGCGTCGAGTGAAGAAAGACGTGATTTCCGAGTTAACAAGGAAAACAGAAGTTATGGTGCACTGCAAGTTGAGCTCTCGACAACAAGCTTTCTATCAAGCTATTAAGAACAAGATATCTCTTGCTGAGTTGTTTGATGGCAGCCGTGGACATTTCAATGAGAAGAAAATTATGAATCTAATGAACATAGTCATTCAGCTGAGAAAGGTTTGCAACCATCCAGAGTTGTTTGAAAGGAATGAGGGAAGCACATATTTCTATTTTGGAGAGATTCCCAATTCTTTTCTTCCCCCTCCTTTTGGGGAGTTGGAGGACATACATTATTCAGGAGGTCGAAATCCTATCACATACAAGGTGCCAAAAGTAGTCCACAATGAGATTGTCCAAAGTTCCGAGGTTCTTTGCTCAGCGATTGGACGTGGTGTTGGCAGAGAGTCATTTCAAAAGCACTTTAACATATTCTCTCCAGAAAATGTGTATCGGTCTGTATATGCACAGGACAATATCTCAGATAGATTGCTTATTAAGAGTGGGACGTTTGGTTTTACCCATTTGATGGATTTGTCCCCAGCAGAGGTTGCATTTCTGGCAACTAGTTCATTTATGGAGAGGCTGTTGTTTTCTATTATGAGACAGGGCCAACAATTTTTGGATGGAACCATAGACTTGCTCATGGAAGACATGGAAGATGACAATGGCAATCACCTTGAGAAATGTAAAGTACGAGCTGTCACACGAATGTTATTGATGCCATCAAGATCTGAGACAGATATCCTGAAAAGGAAAATTGCAACAGGCCTTGCTGATAATCCGTTTAAGGCTCTAGTTAACTCTCATCAGGACAGGCTTCTGTCCAGCATTAAGCTCCTTAACTCAACTTACACGTCCATCCCACGGACCAGAGCTCCACCGATTGATGGCCAATGCTCAGACAGAAACTTTGCCTACCAAATGATGGAAGAATTGCACCAACCCAGGGTCAAGAGGTTGTTAATTGGGTTTGCACGCACATCTGAATTTAATGGACCCAGAAAGCCAGAGGGTCCTCATCCTTTAGTTCAGGAGATTGAATCTGAACTACCTGTTTCACAACCTGCTCTTCAGTTGACATACAAGATTTTCGGTTCTTGCCCCCCCATGCAAAGCTTTGACCCTGCAAAGCTTCTCACGGATTCTGGAAAGCTTCAAACACTTGATATTTTACTGAAACGATTGCGAGCTGAAAACCACCGGGTTCTATTGTTTGCACAAATGACGAAAATGCTAAATATTCTTGAGGACTACATGAATTATAGGAAATATAGATATCTTAGACTTGATGGGTCCTCCACCATCATGGATCGTCGGGATATGGTCAGAGACTTCCAGCTTAGGAATGATATTTTTGTATTCTTGCTGAGTACCAGAGCTGGTGGGCTTGGTATCAATTTGACAGCTGCCGATACTGTTATTTTTTATGAAAGTGATTGGAATCCTACACTAGATTTACAGGCAATGGATAGAGCACATCGGCTGGGCCAGACAAAGGATGTTACTGTCTACCGGCTCATTTGTAAAGAGACGGTTGAGGAAAAGATTTTGCAAAGAGCAAGCCAGAAACATACTGTGCAACAGCTTGTTATGACAGGTGGTCATGTTCAGGATGATCTCTTGGCTCCTGAGGATGTGGTGTCCTTGCTTCTGGATGATGCCCAGTTGGAGCAGAAGTTGAGAGAAATACCACTGCAGGCCAAGGATAGACAAAAGAAAAAACCAACAAAGGCCATACGGGTAGATGCAGAAGGTGATGCAACTTTGGAAGATTTGACTGAAACTGTCACTCAGGGTACTGGGAATGAACCATCTGAGGACACAGAGAAATTGAAATCCAATAACAAAAAGAGGAAAGCTGCTTCTGACAAGCAGATTACACCAAAGCCTAGGAATTCACAGAAGAATGAACTGAATTCTACATCAATGGACTATGAATTGGACGATCCTTTTCTAAATGATGAGCCACAGTCACAGCGACCCAAGAGGTTGAAGAGGCCCAAGAAAAGTGTAAATGAGAAACTCGAACCAGCATTTACTGCCACACCCCAAGTTGATTCATCGCAGATGCAATATCCACATGCAAATAATCTTCCTTCTACATACTCAAACACATGA |
| Protein: MANFVNRNLSERELNSVKRKRRYNNSEGEEEDRHFRARITEDKYRSMLGEHIQKYKRRYKDPLPSPAPPPPPPPPPRMGIPIPKSSLGGSKTRKLGSEQRGGLHDMETTSEWANDITPSKRRDYHEPEFTPKIYYEPPYLDIGDGVTYRIPPSYDKLAASLNLPSFSDMRVEEFYLKGTLDLGSLAAMIANDKRFGPRSQAGMGEPQSQYESLQARLKALTASSSAEKFSLKISEEALNSTIPEGAAGNIRRSILSEGGVMQVYYVKVLEKGDTYEIIERGLPKKPKIIKDPSIIEREEMEKIGKVWVNIVRRDIPKHHRIFTTLHRKQLIDAKRFSENCQREVKMKVSRSLKIMKGAAIRTRKLARDMLLFWKRVDKEMAEVRKKEEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFMSNKPSSQHSEALPIGDEMTDDQGMDLSTAEAGLDDQEEDPEDAELRKEALKAAQDAVSKQKLLTSAFDIECSKLREAADIEGPINDASVAGSSNIDLQTPSTMPVTSTVQAPELFRGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLIVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSANSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTRKTEVMVHCKLSSRQQAFYQAIKNKISLAELFDGSRGHFNEKKIMNLMNIVIQLRKVCNHPELFERNEGSTYFYFGEIPNSFLPPPFGELEDIHYSGGRNPITYKVPKVVHNEIVQSSEVLCSAIGRGVGRESFQKHFNIFSPENVYRSVYAQDNISDRLLIKSGTFGFTHLMDLSPAEVAFLATSSFMERLLFSIMRQGQQFLDGTIDLLMEDMEDDNGNHLEKCKVRAVTRMLLMPSRSETDILKRKIATGLADNPFKALVNSHQDRLLSSIKLLNSTYTSIPRTRAPPIDGQCSDRNFAYQMMEELHQPRVKRLLIGFARTSEFNGPRKPEGPHPLVQEIESELPVSQPALQLTYKIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKHTVQQLVMTGGHVQDDLLAPEDVVSLLLDDAQLEQKLREIPLQAKDRQKKKPTKAIRVDAEGDATLEDLTETVTQGTGNEPSEDTEKLKSNNKKRKAASDKQITPKPRNSQKNELNSTSMDYELDDPFLNDEPQSQRPKRLKRPKKSVNEKLEPAFTATPQVDSSQMQYPHANNLPSTYSNT |